Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM17Q9Y577 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM17Q9Y577 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM17Q9Y577 AL353692.3-201ENST00000407031 1396 ntBASIC21.21■□□□□ 0.99
TRIM17Q9Y577 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 HOXB1-202ENST00000577092 1414 ntBASIC21.2■□□□□ 0.98
TRIM17Q9Y577 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM17Q9Y577 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 ZNF815P-204ENST00000434898 1737 ntBASIC21.19■□□□□ 0.98
TRIM17Q9Y577 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 AC114341.1-201ENST00000618070 349 ntBASIC21.19■□□□□ 0.98
TRIM17Q9Y577 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM17Q9Y577 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 YBX2P1-201ENST00000394192 760 ntBASIC21.18■□□□□ 0.98
TRIM17Q9Y577 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 MIR3197-201ENST00000582241 73 ntBASIC21.18■□□□□ 0.98
TRIM17Q9Y577 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.18■□□□□ 0.98
TRIM17Q9Y577 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 TREX1-205ENST00000625293 1783 ntBASIC21.18■□□□□ 0.98
TRIM17Q9Y577 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM17Q9Y577 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 FGFR3P6-201ENST00000457012 610 ntBASIC21.17■□□□□ 0.98
TRIM17Q9Y577 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 AC134684.3-201ENST00000641758 218 ntBASIC21.17■□□□□ 0.98
TRIM17Q9Y577 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM17Q9Y577 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM17Q9Y577 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms