Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 IRX1P1-201ENST00000438849 1838 ntBASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 BX323043.1-201ENST00000641006 1765 ntBASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 SLC25A1P2-201ENST00000430693 912 ntBASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RPH3AQ9Y2J0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RPH3AQ9Y2J0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RPH3AQ9Y2J0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RPH3AQ9Y2J0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.21■□□□□ 0.34
RPH3AQ9Y2J0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
RPH3AQ9Y2J0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.21■□□□□ 0.34
RPH3AQ9Y2J0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 AC018445.3-201ENST00000624177 1945 ntBASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 AC005363.2-201ENST00000618631 242 ntBASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.2■□□□□ 0.34
RPH3AQ9Y2J0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPH3AQ9Y2J0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPH3AQ9Y2J0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms