Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 KRT89P-201ENST00000620027 1478 ntBASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 KRT8P26-201ENST00000534154 1276 ntBASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 AL121672.3-201ENST00000608644 468 ntBASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPO2Q9UMS6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.59■■□□□ 1.05
SYNPO2Q9UMS6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 KRT18P56-201ENST00000507275 550 ntBASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SYNPO2Q9UMS6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.58■■□□□ 1.04
SYNPO2Q9UMS6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SYNPO2Q9UMS6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SYNPO2Q9UMS6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SYNPO2Q9UMS6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
SYNPO2Q9UMS6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
SYNPO2Q9UMS6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SYNPO2Q9UMS6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SYNPO2Q9UMS6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SYNPO2Q9UMS6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms