Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
DNMT3BQ9UBC3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
DNMT3BQ9UBC3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
DNMT3BQ9UBC3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DNMT3BQ9UBC3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DNMT3BQ9UBC3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
DNMT3BQ9UBC3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DNMT3BQ9UBC3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
DNMT3BQ9UBC3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 RN7SL510P-201ENST00000581311 263 ntBASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.58■□□□□ 0.72
DNMT3BQ9UBC3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 TSPY22P-201ENST00000427496 604 ntBASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 CHCHD2P8-201ENST00000429873 447 ntBASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 RNF126P1-202ENST00000569893 925 ntBASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DNMT3BQ9UBC3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 AC246785.2-201ENST00000432512 513 ntBASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 UNC93B7-201ENST00000509439 705 ntBASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 AC104390.1-201ENST00000555663 520 ntBASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNMT3BQ9UBC3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 KRT8P7-201ENST00000533003 1432 ntBASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.55■□□□□ 0.72
DNMT3BQ9UBC3 AC010240.3-201ENST00000607688 395 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms