Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 KRT126P-201ENST00000549467 1181 ntBASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRIT1Q9P2V4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
LRIT1Q9P2V4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 AL157888.1-201ENST00000631930 593 ntBASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 IRX1P1-201ENST00000438849 1838 ntBASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRIT1Q9P2V4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 KRT18P23-201ENST00000435622 1283 ntBASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT1Q9P2V4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 MIR3917-201ENST00000580971 93 ntBASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT1Q9P2V4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LRIT1Q9P2V4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT1Q9P2V4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT1Q9P2V4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT1Q9P2V4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT1Q9P2V4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT1Q9P2V4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms