Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.25■□□□□ 0.99
COL20A1Q9P218 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.25■□□□□ 0.99
COL20A1Q9P218 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL20A1Q9P218 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
COL20A1Q9P218 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL20A1Q9P218 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL20A1Q9P218 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL20A1Q9P218 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.25■□□□□ 0.99
COL20A1Q9P218 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL20A1Q9P218 MTMR9LP-203ENST00000426597 1545 ntBASIC21.24■□□□□ 0.99
COL20A1Q9P218 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL20A1Q9P218 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL20A1Q9P218 AL645929.1-201ENST00000420084 975 ntBASIC21.24■□□□□ 0.99
COL20A1Q9P218 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.24■□□□□ 0.99
COL20A1Q9P218 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.24■□□□□ 0.99
COL20A1Q9P218 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.24■□□□□ 0.99
COL20A1Q9P218 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.24■□□□□ 0.99
COL20A1Q9P218 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.24■□□□□ 0.99
COL20A1Q9P218 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.24■□□□□ 0.99
COL20A1Q9P218 AC010240.3-201ENST00000607688 395 ntBASIC21.24■□□□□ 0.99
COL20A1Q9P218 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.24■□□□□ 0.99
COL20A1Q9P218 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.24■□□□□ 0.99
COL20A1Q9P218 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.24■□□□□ 0.99
COL20A1Q9P218 HEIH-201ENST00000623091 1652 ntBASIC21.24■□□□□ 0.99
COL20A1Q9P218 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.24■□□□□ 0.99
COL20A1Q9P218 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL20A1Q9P218 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COL20A1Q9P218 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL20A1Q9P218 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.23■□□□□ 0.99
COL20A1Q9P218 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL20A1Q9P218 AL391807.1-203ENST00000604392 2365 ntBASIC21.23■□□□□ 0.99
COL20A1Q9P218 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL20A1Q9P218 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
COL20A1Q9P218 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL20A1Q9P218 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL20A1Q9P218 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.23■□□□□ 0.99
COL20A1Q9P218 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.23■□□□□ 0.99
COL20A1Q9P218 AC069148.1-201ENST00000608741 768 ntBASIC21.23■□□□□ 0.99
COL20A1Q9P218 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.23■□□□□ 0.99
COL20A1Q9P218 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL20A1Q9P218 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL20A1Q9P218 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL20A1Q9P218 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
COL20A1Q9P218 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.23■□□□□ 0.99
COL20A1Q9P218 AL357033.4-201ENST00000617703 1807 ntBASIC21.22■□□□□ 0.99
COL20A1Q9P218 AC034236.2-201ENST00000606662 1610 ntBASIC21.22■□□□□ 0.99
COL20A1Q9P218 KRT8P7-201ENST00000533003 1432 ntBASIC21.22■□□□□ 0.99
COL20A1Q9P218 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL20A1Q9P218 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL20A1Q9P218 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.22■□□□□ 0.99
COL20A1Q9P218 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.22■□□□□ 0.99
COL20A1Q9P218 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.22■□□□□ 0.99
COL20A1Q9P218 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.22■□□□□ 0.99
COL20A1Q9P218 AL136038.4-201ENST00000603606 1261 ntBASIC21.22■□□□□ 0.99
COL20A1Q9P218 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL20A1Q9P218 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.22■□□□□ 0.99
COL20A1Q9P218 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.22■□□□□ 0.99
COL20A1Q9P218 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL20A1Q9P218 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
COL20A1Q9P218 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.22■□□□□ 0.99
COL20A1Q9P218 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
COL20A1Q9P218 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL20A1Q9P218 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
COL20A1Q9P218 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
COL20A1Q9P218 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL20A1Q9P218 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL20A1Q9P218 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL20A1Q9P218 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL20A1Q9P218 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL20A1Q9P218 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL20A1Q9P218 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL20A1Q9P218 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 KRT18P56-201ENST00000507275 550 ntBASIC21.21■□□□□ 0.99
COL20A1Q9P218 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL20A1Q9P218 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.21■□□□□ 0.99
COL20A1Q9P218 Z98044.1-201ENST00000632503 1764 ntBASIC21.2■□□□□ 0.99
COL20A1Q9P218 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.99
COL20A1Q9P218 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL20A1Q9P218 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.2■□□□□ 0.98
COL20A1Q9P218 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL20A1Q9P218 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL20A1Q9P218 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL20A1Q9P218 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL20A1Q9P218 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL20A1Q9P218 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL20A1Q9P218 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.2■□□□□ 0.98
COL20A1Q9P218 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms