Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 AC096733.2-201ENST00000609937 1394 ntBASIC19.14■□□□□ 0.65
UBP1Q9NZI7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBP1Q9NZI7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 TSPY15P-201ENST00000457163 923 ntBASIC19.13■□□□□ 0.65
UBP1Q9NZI7 AC093827.2-201ENST00000512654 315 ntBASIC19.13■□□□□ 0.65
UBP1Q9NZI7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 AC066615.1-201ENST00000640911 628 ntBASIC19.13■□□□□ 0.65
UBP1Q9NZI7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 KRT8P3-201ENST00000519669 1449 ntBASIC19.13■□□□□ 0.65
UBP1Q9NZI7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBP1Q9NZI7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 WIZP1-201ENST00000531444 2299 ntBASIC19.12■□□□□ 0.65
UBP1Q9NZI7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.12■□□□□ 0.65
UBP1Q9NZI7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 AL138781.2-201ENST00000617896 1843 ntBASIC19.12■□□□□ 0.65
UBP1Q9NZI7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 Z98044.1-201ENST00000632503 1764 ntBASIC19.12■□□□□ 0.65
UBP1Q9NZI7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.12■□□□□ 0.65
UBP1Q9NZI7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 AC093525.10-201ENST00000625130 1569 ntBASIC19.12■□□□□ 0.65
UBP1Q9NZI7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 AC079598.2-202ENST00000546624 1451 ntBASIC19.12■□□□□ 0.65
UBP1Q9NZI7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 UNC93B2-201ENST00000285383 730 ntBASIC19.12■□□□□ 0.65
UBP1Q9NZI7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 AL390955.1-201ENST00000428694 934 ntBASIC19.12■□□□□ 0.65
UBP1Q9NZI7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 AL355075.4-201ENST00000554988 638 ntBASIC19.12■□□□□ 0.65
UBP1Q9NZI7 MIR4497-201ENST00000583208 89 ntBASIC19.12■□□□□ 0.65
UBP1Q9NZI7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 AP000525.1-201ENST00000608286 694 ntBASIC19.12■□□□□ 0.65
UBP1Q9NZI7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.12■□□□□ 0.65
UBP1Q9NZI7 ANO7L1-203ENST00000602586 1720 ntBASIC19.11■□□□□ 0.65
UBP1Q9NZI7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 HEIH-201ENST00000623091 1652 ntBASIC19.11■□□□□ 0.65
UBP1Q9NZI7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBP1Q9NZI7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBP1Q9NZI7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms