Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 AC026271.2-201ENST00000428091 497 ntBASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 AC073210.2-201ENST00000430369 194 ntBASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 ZNF815P-204ENST00000434898 1737 ntBASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 RARRES2P6-201ENST00000567333 442 ntBASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 AL162727.3-201ENST00000635661 2787 ntBASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf4Q9NQ89 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 MKRN4P-201ENST00000444706 1521 ntBASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 CICP6-201ENST00000457191 2729 ntBASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 AC068880.1-201ENST00000507289 2297 ntBASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C12orf4Q9NQ89 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 LINC01126-201ENST00000623515 1646 ntBASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 AL162430.1-201ENST00000480705 870 ntBASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.3■□□□□ 0.2
C12orf4Q9NQ89 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms