Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.05■□□□□ 0.16
GCM1Q9NP62 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.05■□□□□ 0.16
GCM1Q9NP62 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GCM1Q9NP62 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.05■□□□□ 0.16
GCM1Q9NP62 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.05■□□□□ 0.16
GCM1Q9NP62 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GCM1Q9NP62 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.05■□□□□ 0.16
GCM1Q9NP62 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 CCR12P-201ENST00000446203 998 ntBASIC16.05■□□□□ 0.16
GCM1Q9NP62 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.05■□□□□ 0.16
GCM1Q9NP62 EGLN1P1-201ENST00000531623 762 ntBASIC16.05■□□□□ 0.16
GCM1Q9NP62 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GCM1Q9NP62 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.05■□□□□ 0.16
GCM1Q9NP62 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.05■□□□□ 0.16
GCM1Q9NP62 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.05■□□□□ 0.16
GCM1Q9NP62 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
GCM1Q9NP62 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.05■□□□□ 0.16
GCM1Q9NP62 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GCM1Q9NP62 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.04■□□□□ 0.16
GCM1Q9NP62 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
GCM1Q9NP62 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.04■□□□□ 0.16
GCM1Q9NP62 LINC01568-207ENST00000641790 1380 ntBASIC16.04■□□□□ 0.16
GCM1Q9NP62 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.04■□□□□ 0.16
GCM1Q9NP62 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.04■□□□□ 0.16
GCM1Q9NP62 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.04■□□□□ 0.16
GCM1Q9NP62 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.04■□□□□ 0.16
GCM1Q9NP62 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.04■□□□□ 0.16
GCM1Q9NP62 AC145285.6-201ENST00000604632 637 ntBASIC16.04■□□□□ 0.16
GCM1Q9NP62 LINC01023-201ENST00000606054 436 ntBASIC16.04■□□□□ 0.16
GCM1Q9NP62 AC012306.2-201ENST00000609350 630 ntBASIC16.04■□□□□ 0.16
GCM1Q9NP62 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.04■□□□□ 0.16
GCM1Q9NP62 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
GCM1Q9NP62 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.04■□□□□ 0.16
GCM1Q9NP62 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GCM1Q9NP62 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCM1Q9NP62 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCM1Q9NP62 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.03■□□□□ 0.16
GCM1Q9NP62 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.03■□□□□ 0.16
GCM1Q9NP62 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
GCM1Q9NP62 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCM1Q9NP62 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCM1Q9NP62 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GCM1Q9NP62 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCM1Q9NP62 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.03■□□□□ 0.16
GCM1Q9NP62 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.03■□□□□ 0.16
GCM1Q9NP62 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GCM1Q9NP62 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GCM1Q9NP62 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCM1Q9NP62 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.03■□□□□ 0.16
GCM1Q9NP62 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
GCM1Q9NP62 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCM1Q9NP62 TSPY17P-201ENST00000450329 467 ntBASIC16.03■□□□□ 0.16
GCM1Q9NP62 AC128688.1-201ENST00000487626 519 ntBASIC16.03■□□□□ 0.16
GCM1Q9NP62 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCM1Q9NP62 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.03■□□□□ 0.16
GCM1Q9NP62 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.03■□□□□ 0.16
GCM1Q9NP62 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
GCM1Q9NP62 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GCM1Q9NP62 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.03■□□□□ 0.16
GCM1Q9NP62 AL023803.3-201ENST00000615559 522 ntBASIC16.03■□□□□ 0.16
GCM1Q9NP62 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.03■□□□□ 0.16
GCM1Q9NP62 AC097493.4-201ENST00000641197 219 ntBASIC16.03■□□□□ 0.16
GCM1Q9NP62 AC116562.4-202ENST00000641738 218 ntBASIC16.03■□□□□ 0.16
GCM1Q9NP62 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms