Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM2Q9C040 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.3■□□□□ 0.36
TRIM2Q9C040 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.3■□□□□ 0.36
TRIM2Q9C040 AL031985.4-201ENST00000642138 673 ntBASIC17.3■□□□□ 0.36
TRIM2Q9C040 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM2Q9C040 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM2Q9C040 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM2Q9C040 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM2Q9C040 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM2Q9C040 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM2Q9C040 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRIM2Q9C040 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM2Q9C040 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM2Q9C040 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM2Q9C040 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM2Q9C040 RCC2P6-201ENST00000526625 1557 ntBASIC17.29■□□□□ 0.36
TRIM2Q9C040 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM2Q9C040 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM2Q9C040 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM2Q9C040 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TRIM2Q9C040 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM2Q9C040 AC012618.2-201ENST00000428058 849 ntBASIC17.29■□□□□ 0.36
TRIM2Q9C040 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM2Q9C040 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM2Q9C040 AC073195.1-201ENST00000607241 877 ntBASIC17.29■□□□□ 0.36
TRIM2Q9C040 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM2Q9C040 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM2Q9C040 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM2Q9C040 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM2Q9C040 ANO7L1-203ENST00000602586 1720 ntBASIC17.29■□□□□ 0.36
TRIM2Q9C040 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM2Q9C040 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
TRIM2Q9C040 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM2Q9C040 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM2Q9C040 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRIM2Q9C040 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM2Q9C040 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 SNORA78-201ENST00000459373 127 ntBASIC17.28■□□□□ 0.36
TRIM2Q9C040 AC091390.4-202ENST00000476426 537 ntBASIC17.28■□□□□ 0.36
TRIM2Q9C040 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 AF186192.3-201ENST00000583427 947 ntBASIC17.28■□□□□ 0.36
TRIM2Q9C040 AC233702.5-201ENST00000584107 538 ntBASIC17.28■□□□□ 0.36
TRIM2Q9C040 CR392000.1-201ENST00000624770 1228 ntBASIC17.28■□□□□ 0.36
TRIM2Q9C040 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 WIZP1-201ENST00000531444 2299 ntBASIC17.28■□□□□ 0.36
TRIM2Q9C040 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TRIM2Q9C040 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM2Q9C040 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM2Q9C040 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM2Q9C040 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM2Q9C040 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM2Q9C040 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 RPS2P55-201ENST00000397318 883 ntBASIC17.27■□□□□ 0.36
TRIM2Q9C040 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 AC107956.1-201ENST00000494359 873 ntBASIC17.27■□□□□ 0.36
TRIM2Q9C040 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM2Q9C040 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRIM2Q9C040 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM2Q9C040 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRIM2Q9C040 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.27■□□□□ 0.36
TRIM2Q9C040 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms