Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC011498.5-201ENST00000592027 486 ntBASIC19.59■□□□□ 0.73
LRRC3Q9BY71 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3Q9BY71 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRC3Q9BY71 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LRRC3Q9BY71 KRT8P32-201ENST00000512863 1461 ntBASIC19.59■□□□□ 0.73
LRRC3Q9BY71 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.59■□□□□ 0.73
LRRC3Q9BY71 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3Q9BY71 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3Q9BY71 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC3Q9BY71 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3Q9BY71 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC3Q9BY71 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRC3Q9BY71 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.58■□□□□ 0.73
LRRC3Q9BY71 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC3Q9BY71 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
LRRC3Q9BY71 IRX1P1-201ENST00000438849 1838 ntBASIC19.58■□□□□ 0.73
LRRC3Q9BY71 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.58■□□□□ 0.73
LRRC3Q9BY71 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC3Q9BY71 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRC3Q9BY71 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRC3Q9BY71 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC3Q9BY71 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.58■□□□□ 0.73
LRRC3Q9BY71 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC3Q9BY71 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 AC016734.2-201ENST00000624325 1377 ntBASIC19.57■□□□□ 0.72
LRRC3Q9BY71 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 AL450487.1-201ENST00000426799 995 ntBASIC19.57■□□□□ 0.72
LRRC3Q9BY71 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 HOXB1-202ENST00000577092 1414 ntBASIC19.57■□□□□ 0.72
LRRC3Q9BY71 AL391807.1-203ENST00000604392 2365 ntBASIC19.57■□□□□ 0.72
LRRC3Q9BY71 AL162741.1-201ENST00000565563 1558 ntBASIC19.57■□□□□ 0.72
LRRC3Q9BY71 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC3Q9BY71 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 MIR662-201ENST00000384847 95 ntBASIC19.56■□□□□ 0.72
LRRC3Q9BY71 MIR564-202ENST00000385049 94 ntBASIC19.56■□□□□ 0.72
LRRC3Q9BY71 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 AC104390.1-201ENST00000555663 520 ntBASIC19.56■□□□□ 0.72
LRRC3Q9BY71 MIR3180-1-201ENST00000580374 94 ntBASIC19.56■□□□□ 0.72
LRRC3Q9BY71 MIR3180-3-201ENST00000584616 94 ntBASIC19.56■□□□□ 0.72
LRRC3Q9BY71 AC012313.10-201ENST00000623509 926 ntBASIC19.56■□□□□ 0.72
LRRC3Q9BY71 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC3Q9BY71 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 AL158211.5-201ENST00000623583 2518 ntBASIC19.55■□□□□ 0.72
LRRC3Q9BY71 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC3Q9BY71 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms