Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 AC026271.3-201ENST00000571884 352 ntBASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RSPO3Q9BXY4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RSPO3Q9BXY4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RSPO3Q9BXY4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RSPO3Q9BXY4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RSPO3Q9BXY4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RSPO3Q9BXY4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.27■□□□□ 0.35
RSPO3Q9BXY4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RSPO3Q9BXY4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 FAM197Y1-201ENST00000421178 764 ntBASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 ITM2C-210ENST00000620962 501 ntBASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 KRT8P45-201ENST00000414328 1447 ntBASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 ESPNP-201ENST00000270691 2015 ntBASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 AC008556.1-201ENST00000610908 2040 ntBASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RSPO3Q9BXY4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 AP000692.2-201ENST00000608391 879 ntBASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RSPO3Q9BXY4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 AL353807.1-201ENST00000427475 662 ntBASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 FAM207BP-201ENST00000447172 505 ntBASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms