Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 NTF6B-201ENST00000591913 560 ntBASIC17.93■□□□□ 0.46
NDC1Q9BTX1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 AC008622.2-201ENST00000617006 1229 ntBASIC17.93■□□□□ 0.46
NDC1Q9BTX1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NDC1Q9BTX1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.92■□□□□ 0.46
NDC1Q9BTX1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 AC009947.2-201ENST00000444014 672 ntBASIC17.92■□□□□ 0.46
NDC1Q9BTX1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 AC063952.2-201ENST00000498792 1227 ntBASIC17.92■□□□□ 0.46
NDC1Q9BTX1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 AC022616.7-201ENST00000525383 220 ntBASIC17.92■□□□□ 0.46
NDC1Q9BTX1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 WWOX-216ENST00000569818 525 ntBASIC17.92■□□□□ 0.46
NDC1Q9BTX1 NEK4P2-201ENST00000580004 1012 ntBASIC17.92■□□□□ 0.46
NDC1Q9BTX1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 MIR4674-201ENST00000582457 87 ntBASIC17.92■□□□□ 0.46
NDC1Q9BTX1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDC1Q9BTX1 FEM1AP3-201ENST00000403722 1741 ntBASIC17.92■□□□□ 0.46
NDC1Q9BTX1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 AC141586.3-201ENST00000562166 1838 ntBASIC17.91■□□□□ 0.46
NDC1Q9BTX1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 GPAT2P1-201ENST00000444924 1672 ntBASIC17.91■□□□□ 0.46
NDC1Q9BTX1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.91■□□□□ 0.46
NDC1Q9BTX1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 MCCD1P1-208ENST00000445732 328 ntBASIC17.91■□□□□ 0.46
NDC1Q9BTX1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 AC087388.1-201ENST00000571370 1112 ntBASIC17.91■□□□□ 0.46
NDC1Q9BTX1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 AC011558.1-201ENST00000623459 338 ntBASIC17.91■□□□□ 0.46
NDC1Q9BTX1 AL023973.1-201ENST00000624619 620 ntBASIC17.91■□□□□ 0.46
NDC1Q9BTX1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDC1Q9BTX1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 AL023284.2-201ENST00000405850 579 ntBASIC17.9■□□□□ 0.46
NDC1Q9BTX1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.9■□□□□ 0.46
NDC1Q9BTX1 CR769767.2-201ENST00000622735 460 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms