Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 AC090340.1-201ENST00000620778 4980 ntBASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 AC128688.1-201ENST00000487626 519 ntBASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 ZNF815P-204ENST00000434898 1737 ntBASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCGF1Q9BSM1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 AC093503.3-201ENST00000624917 2352 ntBASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 KRT8P41-201ENST00000533985 1514 ntBASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 RCN1P1-201ENST00000400413 996 ntBASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 TMPOP1-202ENST00000424642 1267 ntBASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 LIN28AP1-201ENST00000429574 405 ntBASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 AL137013.1-201ENST00000432946 1228 ntBASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 ECEL1P2-202ENST00000465689 757 ntBASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 EGLN1P1-201ENST00000531623 762 ntBASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 AC096733.2-201ENST00000609937 1394 ntBASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCGF1Q9BSM1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCGF1Q9BSM1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms