Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 AC090340.1-201ENST00000620778 4980 ntBASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 TSPY21P-201ENST00000433481 731 ntBASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 DGCR10-201ENST00000609839 495 ntBASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUDCD1Q96RS6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 FAM207BP-201ENST00000447172 505 ntBASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 AP000692.2-201ENST00000608391 879 ntBASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.41■□□□□ 0.7
NUDCD1Q96RS6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 TEX21P-204ENST00000641479 1693 ntBASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 AL355075.4-201ENST00000554988 638 ntBASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NUDCD1Q96RS6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUDCD1Q96RS6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUDCD1Q96RS6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
NUDCD1Q96RS6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUDCD1Q96RS6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUDCD1Q96RS6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUDCD1Q96RS6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUDCD1Q96RS6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms