Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.4■□□□□ 0.54
CFAP54Q96N23 AC002347.1-201ENST00000569543 541 ntBASIC18.4■□□□□ 0.54
CFAP54Q96N23 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CFAP54Q96N23 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.4■□□□□ 0.54
CFAP54Q96N23 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CFAP54Q96N23 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP54Q96N23 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP54Q96N23 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.4■□□□□ 0.54
CFAP54Q96N23 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP54Q96N23 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP54Q96N23 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.4■□□□□ 0.54
CFAP54Q96N23 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP54Q96N23 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
CFAP54Q96N23 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP54Q96N23 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP54Q96N23 AL160286.2-201ENST00000567150 934 ntBASIC18.4■□□□□ 0.54
CFAP54Q96N23 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP54Q96N23 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CFAP54Q96N23 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CFAP54Q96N23 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.39■□□□□ 0.54
CFAP54Q96N23 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CFAP54Q96N23 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.39■□□□□ 0.54
CFAP54Q96N23 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.54
CFAP54Q96N23 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CFAP54Q96N23 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CFAP54Q96N23 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CFAP54Q96N23 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CFAP54Q96N23 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.39■□□□□ 0.54
CFAP54Q96N23 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.39■□□□□ 0.54
CFAP54Q96N23 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.39■□□□□ 0.54
CFAP54Q96N23 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.39■□□□□ 0.54
CFAP54Q96N23 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP54Q96N23 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP54Q96N23 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP54Q96N23 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP54Q96N23 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CFAP54Q96N23 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
CFAP54Q96N23 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP54Q96N23 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP54Q96N23 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP54Q96N23 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CFAP54Q96N23 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP54Q96N23 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.39■□□□□ 0.53
CFAP54Q96N23 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.39■□□□□ 0.53
CFAP54Q96N23 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.39■□□□□ 0.53
CFAP54Q96N23 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.39■□□□□ 0.53
CFAP54Q96N23 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP54Q96N23 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP54Q96N23 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 AC012640.2-201ENST00000561606 901 ntBASIC18.38■□□□□ 0.53
CFAP54Q96N23 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 AC006128.1-201ENST00000624704 1661 ntBASIC18.38■□□□□ 0.53
CFAP54Q96N23 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 AC008608.2-201ENST00000606089 416 ntBASIC18.38■□□□□ 0.53
CFAP54Q96N23 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.38■□□□□ 0.53
CFAP54Q96N23 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP54Q96N23 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CFAP54Q96N23 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CFAP54Q96N23 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CFAP54Q96N23 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CFAP54Q96N23 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.37■□□□□ 0.53
CFAP54Q96N23 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CFAP54Q96N23 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CFAP54Q96N23 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.37■□□□□ 0.53
CFAP54Q96N23 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.37■□□□□ 0.53
CFAP54Q96N23 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.37■□□□□ 0.53
CFAP54Q96N23 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CFAP54Q96N23 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CFAP54Q96N23 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CFAP54Q96N23 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CFAP54Q96N23 AC005034.1-201ENST00000426657 489 ntBASIC18.37■□□□□ 0.53
CFAP54Q96N23 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.37■□□□□ 0.53
CFAP54Q96N23 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CFAP54Q96N23 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.37■□□□□ 0.53
CFAP54Q96N23 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CFAP54Q96N23 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms