Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 YBX1P2-201ENST00000489612 999 ntBASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 AL512353.2-201ENST00000448759 1962 ntBASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 AL049812.1-201ENST00000432563 2267 ntBASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.39■□□□□ 0.7
PRICKLE1Q96MT3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PRICKLE1Q96MT3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.39■□□□□ 0.7
PRICKLE1Q96MT3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 AK4P3-201ENST00000418260 669 ntBASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 COX11P1-201ENST00000489116 835 ntBASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 WWOX-216ENST00000569818 525 ntBASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 AL445228.2-201ENST00000605589 952 ntBASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 RCC2P3-201ENST00000418112 1537 ntBASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PRICKLE1Q96MT3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 MCCD1P1-208ENST00000445732 328 ntBASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRICKLE1Q96MT3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 KRT18P35-201ENST00000510488 1269 ntBASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 AL441883.1-201ENST00000566170 1045 ntBASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 AC011558.1-201ENST00000623459 338 ntBASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRICKLE1Q96MT3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PRICKLE1Q96MT3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE1Q96MT3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.36■□□□□ 0.69
PRICKLE1Q96MT3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.36■□□□□ 0.69
PRICKLE1Q96MT3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE1Q96MT3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE1Q96MT3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.36■□□□□ 0.69
PRICKLE1Q96MT3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE1Q96MT3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.36■□□□□ 0.69
PRICKLE1Q96MT3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE1Q96MT3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE1Q96MT3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRICKLE1Q96MT3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms