Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
C9orf72Q96LT7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf72Q96LT7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.36■□□□□ 0.69
C9orf72Q96LT7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf72Q96LT7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
C9orf72Q96LT7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf72Q96LT7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.36■□□□□ 0.69
C9orf72Q96LT7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf72Q96LT7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
C9orf72Q96LT7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf72Q96LT7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 MIR718-201ENST00000390190 70 ntBASIC19.35■□□□□ 0.69
C9orf72Q96LT7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 AL023875.1-201ENST00000640777 796 ntBASIC19.35■□□□□ 0.69
C9orf72Q96LT7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf72Q96LT7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 AC068880.1-201ENST00000507289 2297 ntBASIC19.34■□□□□ 0.69
C9orf72Q96LT7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 AC133681.1-201ENST00000465482 601 ntBASIC19.34■□□□□ 0.69
C9orf72Q96LT7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 AC124016.1-201ENST00000609552 612 ntBASIC19.34■□□□□ 0.69
C9orf72Q96LT7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.34■□□□□ 0.69
C9orf72Q96LT7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
C9orf72Q96LT7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf72Q96LT7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
C9orf72Q96LT7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf72Q96LT7 AC126763.1-201ENST00000552015 2118 ntBASIC19.33■□□□□ 0.69
C9orf72Q96LT7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf72Q96LT7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf72Q96LT7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf72Q96LT7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf72Q96LT7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf72Q96LT7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf72Q96LT7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
C9orf72Q96LT7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf72Q96LT7 AC239809.2-201ENST00000415381 517 ntBASIC19.33■□□□□ 0.68
C9orf72Q96LT7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.33■□□□□ 0.68
C9orf72Q96LT7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
C9orf72Q96LT7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.33■□□□□ 0.68
C9orf72Q96LT7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.33■□□□□ 0.68
C9orf72Q96LT7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.33■□□□□ 0.68
C9orf72Q96LT7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.33■□□□□ 0.68
C9orf72Q96LT7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf72Q96LT7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf72Q96LT7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf72Q96LT7 NOC2LP2-201ENST00000407594 1944 ntBASIC19.33■□□□□ 0.68
C9orf72Q96LT7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf72Q96LT7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.32■□□□□ 0.68
C9orf72Q96LT7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
C9orf72Q96LT7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf72Q96LT7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
C9orf72Q96LT7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf72Q96LT7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.32■□□□□ 0.68
C9orf72Q96LT7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms