Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SPDYE15P-201ENST00000424157 909 ntBASIC20.27■□□□□ 0.84
SNX27Q96L92 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX27Q96L92 AC246785.2-201ENST00000432512 513 ntBASIC20.27■□□□□ 0.84
SNX27Q96L92 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.27■□□□□ 0.84
SNX27Q96L92 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SNX27Q96L92 AC024243.1-201ENST00000609234 778 ntBASIC20.27■□□□□ 0.84
SNX27Q96L92 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNX27Q96L92 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
SNX27Q96L92 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNX27Q96L92 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNX27Q96L92 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
SNX27Q96L92 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.26■□□□□ 0.83
SNX27Q96L92 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.26■□□□□ 0.83
SNX27Q96L92 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
SNX27Q96L92 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SNX27Q96L92 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SNX27Q96L92 STARP1-201ENST00000397973 869 ntBASIC20.26■□□□□ 0.83
SNX27Q96L92 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.26■□□□□ 0.83
SNX27Q96L92 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.26■□□□□ 0.83
SNX27Q96L92 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.26■□□□□ 0.83
SNX27Q96L92 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX27Q96L92 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SNX27Q96L92 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.26■□□□□ 0.83
SNX27Q96L92 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.26■□□□□ 0.83
SNX27Q96L92 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
SNX27Q96L92 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SNX27Q96L92 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX27Q96L92 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SNX27Q96L92 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX27Q96L92 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SNX27Q96L92 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SNX27Q96L92 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 MIR564-202ENST00000385049 94 ntBASIC20.25■□□□□ 0.83
SNX27Q96L92 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX27Q96L92 SEC1P-202ENST00000473944 940 ntBASIC20.25■□□□□ 0.83
SNX27Q96L92 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX27Q96L92 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX27Q96L92 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX27Q96L92 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.25■□□□□ 0.83
SNX27Q96L92 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.25■□□□□ 0.83
SNX27Q96L92 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX27Q96L92 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.25■□□□□ 0.83
SNX27Q96L92 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.25■□□□□ 0.83
SNX27Q96L92 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.24■□□□□ 0.83
SNX27Q96L92 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.24■□□□□ 0.83
SNX27Q96L92 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.24■□□□□ 0.83
SNX27Q96L92 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX27Q96L92 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX27Q96L92 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SNX27Q96L92 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX27Q96L92 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNX27Q96L92 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNX27Q96L92 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.24■□□□□ 0.83
SNX27Q96L92 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.24■□□□□ 0.83
SNX27Q96L92 AL671277.2-201ENST00000458060 996 ntBASIC20.24■□□□□ 0.83
SNX27Q96L92 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.24■□□□□ 0.83
SNX27Q96L92 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.24■□□□□ 0.83
SNX27Q96L92 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX27Q96L92 AC112497.1-201ENST00000624824 639 ntBASIC20.24■□□□□ 0.83
SNX27Q96L92 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX27Q96L92 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX27Q96L92 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX27Q96L92 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SNX27Q96L92 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX27Q96L92 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNX27Q96L92 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SNX27Q96L92 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNX27Q96L92 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms