Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.88■□□□□ 0.29
PTP4A1Q93096 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.88■□□□□ 0.29
PTP4A1Q93096 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.88■□□□□ 0.29
PTP4A1Q93096 AC128676.1-201ENST00000454392 318 ntBASIC16.88■□□□□ 0.29
PTP4A1Q93096 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.88■□□□□ 0.29
PTP4A1Q93096 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.88■□□□□ 0.29
PTP4A1Q93096 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.88■□□□□ 0.29
PTP4A1Q93096 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.88■□□□□ 0.29
PTP4A1Q93096 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 AL499627.1-201ENST00000569373 2188 ntBASIC16.88■□□□□ 0.29
PTP4A1Q93096 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.88■□□□□ 0.29
PTP4A1Q93096 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 TSPY20P-201ENST00000450910 630 ntBASIC16.87■□□□□ 0.29
PTP4A1Q93096 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 RN7SL471P-201ENST00000580476 299 ntBASIC16.87■□□□□ 0.29
PTP4A1Q93096 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 AC073648.6-201ENST00000641589 218 ntBASIC16.87■□□□□ 0.29
PTP4A1Q93096 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PTP4A1Q93096 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTP4A1Q93096 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
PTP4A1Q93096 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 MTMR9LP-203ENST00000426597 1545 ntBASIC16.86■□□□□ 0.29
PTP4A1Q93096 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.86■□□□□ 0.29
PTP4A1Q93096 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PTP4A1Q93096 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.86■□□□□ 0.29
PTP4A1Q93096 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.86■□□□□ 0.29
PTP4A1Q93096 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.86■□□□□ 0.29
PTP4A1Q93096 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.86■□□□□ 0.29
PTP4A1Q93096 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 Z85996.1-201ENST00000494644 937 ntBASIC16.86■□□□□ 0.29
PTP4A1Q93096 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.86■□□□□ 0.29
PTP4A1Q93096 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.86■□□□□ 0.29
PTP4A1Q93096 AC068587.9-201ENST00000641814 219 ntBASIC16.86■□□□□ 0.29
PTP4A1Q93096 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.86■□□□□ 0.29
PTP4A1Q93096 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.86■□□□□ 0.29
PTP4A1Q93096 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTP4A1Q93096 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTP4A1Q93096 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.85■□□□□ 0.29
PTP4A1Q93096 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms