Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24■■□□□ 1.43
SMARCC1Q92922 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMARCC1Q92922 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMARCC1Q92922 LSM5-204ENST00000409909 740 ntTSL 2 BASIC24■■□□□ 1.43
SMARCC1Q92922 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC24■■□□□ 1.43
SMARCC1Q92922 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC24■■□□□ 1.43
SMARCC1Q92922 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMARCC1Q92922 AF238378.1-201ENST00000526806 358 ntBASIC24■■□□□ 1.43
SMARCC1Q92922 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC24■■□□□ 1.43
SMARCC1Q92922 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMARCC1Q92922 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC24■■□□□ 1.43
SMARCC1Q92922 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24■■□□□ 1.43
SMARCC1Q92922 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC1Q92922 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC1Q92922 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC1Q92922 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.99■■□□□ 1.43
SMARCC1Q92922 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC1Q92922 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC1Q92922 PMS2P1-201ENST00000431037 1228 ntBASIC23.99■■□□□ 1.43
SMARCC1Q92922 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.99■■□□□ 1.43
SMARCC1Q92922 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC23.99■■□□□ 1.43
SMARCC1Q92922 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
SMARCC1Q92922 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.99■■□□□ 1.43
SMARCC1Q92922 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
SMARCC1Q92922 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.99■■□□□ 1.43
SMARCC1Q92922 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC1Q92922 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC1Q92922 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.99■■□□□ 1.43
SMARCC1Q92922 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC1Q92922 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC1Q92922 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC1Q92922 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.99■■□□□ 1.43
SMARCC1Q92922 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.99■■□□□ 1.43
SMARCC1Q92922 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.99■■□□□ 1.43
SMARCC1Q92922 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC1Q92922 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.99■■□□□ 1.43
SMARCC1Q92922 TEX21P-204ENST00000641479 1693 ntBASIC23.99■■□□□ 1.43
SMARCC1Q92922 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SMARCC1Q92922 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.98■■□□□ 1.43
SMARCC1Q92922 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.98■■□□□ 1.43
SMARCC1Q92922 AC006333.2-201ENST00000607957 2099 ntBASIC23.98■■□□□ 1.43
SMARCC1Q92922 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.98■■□□□ 1.43
SMARCC1Q92922 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
SMARCC1Q92922 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.98■■□□□ 1.43
SMARCC1Q92922 AP001005.1-201ENST00000571755 1248 ntBASIC23.98■■□□□ 1.43
SMARCC1Q92922 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.98■■□□□ 1.43
SMARCC1Q92922 AP005901.3-202ENST00000581653 237 ntBASIC23.98■■□□□ 1.43
SMARCC1Q92922 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.98■■□□□ 1.43
SMARCC1Q92922 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.98■■□□□ 1.43
SMARCC1Q92922 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 KRT89P-201ENST00000620027 1478 ntBASIC23.98■■□□□ 1.43
SMARCC1Q92922 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
SMARCC1Q92922 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
SMARCC1Q92922 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC1Q92922 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC1Q92922 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC1Q92922 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC1Q92922 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
SMARCC1Q92922 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC1Q92922 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC1Q92922 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC1Q92922 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.97■■□□□ 1.43
SMARCC1Q92922 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.97■■□□□ 1.43
SMARCC1Q92922 NUS1P2-201ENST00000417358 873 ntBASIC23.97■■□□□ 1.43
SMARCC1Q92922 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC1Q92922 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC23.97■■□□□ 1.43
SMARCC1Q92922 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
SMARCC1Q92922 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC1Q92922 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC1Q92922 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC1Q92922 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.96■■□□□ 1.43
SMARCC1Q92922 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
SMARCC1Q92922 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC1Q92922 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC1Q92922 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SMARCC1Q92922 AL353692.3-201ENST00000407031 1396 ntBASIC23.96■■□□□ 1.43
SMARCC1Q92922 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC1Q92922 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.96■■□□□ 1.43
SMARCC1Q92922 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC1Q92922 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
SMARCC1Q92922 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
SMARCC1Q92922 POM121L3P-201ENST00000419331 1163 ntBASIC23.96■■□□□ 1.43
SMARCC1Q92922 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.96■■□□□ 1.43
SMARCC1Q92922 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.96■■□□□ 1.43
SMARCC1Q92922 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.96■■□□□ 1.43
SMARCC1Q92922 RNA5SP419-201ENST00000515908 135 ntBASIC23.96■■□□□ 1.43
SMARCC1Q92922 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC23.96■■□□□ 1.43
SMARCC1Q92922 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms