Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 MFAP1P1-201ENST00000442257 1255 ntBASIC18.35■□□□□ 0.53
ATL1Q8WXF7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 KRT17P2-201ENST00000300992 1314 ntBASIC18.34■□□□□ 0.53
ATL1Q8WXF7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 AL031598.1-201ENST00000561511 1773 ntBASIC18.34■□□□□ 0.53
ATL1Q8WXF7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATL1Q8WXF7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATL1Q8WXF7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATL1Q8WXF7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATL1Q8WXF7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATL1Q8WXF7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATL1Q8WXF7 KRT8P32-201ENST00000512863 1461 ntBASIC18.33■□□□□ 0.53
ATL1Q8WXF7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.53
ATL1Q8WXF7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATL1Q8WXF7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.33■□□□□ 0.53
ATL1Q8WXF7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.33■□□□□ 0.53
ATL1Q8WXF7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATL1Q8WXF7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
ATL1Q8WXF7 AL138781.2-201ENST00000617896 1843 ntBASIC18.33■□□□□ 0.53
ATL1Q8WXF7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATL1Q8WXF7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 UNC93B2-201ENST00000285383 730 ntBASIC18.33■□□□□ 0.52
ATL1Q8WXF7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 CA15P1-201ENST00000481698 905 ntBASIC18.33■□□□□ 0.52
ATL1Q8WXF7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 AP005242.2-201ENST00000580065 1175 ntBASIC18.33■□□□□ 0.52
ATL1Q8WXF7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 HEIH-201ENST00000623091 1652 ntBASIC18.33■□□□□ 0.52
ATL1Q8WXF7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 AL512353.2-201ENST00000448759 1962 ntBASIC18.33■□□□□ 0.52
ATL1Q8WXF7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATL1Q8WXF7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 CRYGFP-201ENST00000418459 633 ntBASIC18.32■□□□□ 0.52
ATL1Q8WXF7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.32■□□□□ 0.52
ATL1Q8WXF7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms