Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 AL032819.2-201ENST00000624543 2162 ntBASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 TPM4P1-201ENST00000436100 807 ntBASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 GPR32P1-201ENST00000601788 811 ntBASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CASKIN1Q8WXD9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC29.18■■■□□ 2.26
CASKIN1Q8WXD9 NFYC-AS1-201ENST00000606277 1687 ntBASIC29.18■■■□□ 2.26
CASKIN1Q8WXD9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CASKIN1Q8WXD9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC29.18■■■□□ 2.26
CASKIN1Q8WXD9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
CASKIN1Q8WXD9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC29.18■■■□□ 2.26
CASKIN1Q8WXD9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC29.18■■■□□ 2.26
CASKIN1Q8WXD9 AC026396.1-201ENST00000419388 421 ntBASIC29.18■■■□□ 2.26
CASKIN1Q8WXD9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC29.18■■■□□ 2.26
CASKIN1Q8WXD9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC29.18■■■□□ 2.26
CASKIN1Q8WXD9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC29.18■■■□□ 2.26
CASKIN1Q8WXD9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CASKIN1Q8WXD9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 KRT18P1-202ENST00000452408 1331 ntBASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 IGHGP-201ENST00000390555 1178 ntBASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 AC111152.3-201ENST00000569699 673 ntBASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CASKIN1Q8WXD9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 AC093484.2-201ENST00000580996 2166 ntBASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CASKIN1Q8WXD9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 NUS1P1-201ENST00000446295 882 ntBASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 TOB2P1-201ENST00000469761 992 ntBASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 UNC93B7-201ENST00000509439 705 ntBASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 AC012615.1-201ENST00000565797 1299 ntBASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 RN7SL510P-201ENST00000581311 263 ntBASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 AC005332.3-201ENST00000589904 676 ntBASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 KRT89P-201ENST00000620027 1478 ntBASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
CASKIN1Q8WXD9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 AP003733.1-201ENST00000491725 852 ntBASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC29.14■■■□□ 2.26
CASKIN1Q8WXD9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms