Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRUNE2Q8WUY3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRUNE2Q8WUY3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRUNE2Q8WUY3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRUNE2Q8WUY3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.61■□□□□ 0.73
PRUNE2Q8WUY3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRUNE2Q8WUY3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.61■□□□□ 0.73
PRUNE2Q8WUY3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRUNE2Q8WUY3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.61■□□□□ 0.73
PRUNE2Q8WUY3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRUNE2Q8WUY3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 AL023284.2-201ENST00000405850 579 ntBASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 MIR770-201ENST00000390219 98 ntBASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 AC007274.1-201ENST00000439805 662 ntBASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 AC138761.1-201ENST00000584393 385 ntBASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 IGHGP-201ENST00000390555 1178 ntBASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PRUNE2Q8WUY3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 MIR3180-5-201ENST00000583743 153 ntBASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRUNE2Q8WUY3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 AC112907.3-201ENST00000577781 2400 ntBASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 AC023274.1-201ENST00000418278 595 ntBASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 AC133561.1-201ENST00000568600 2415 ntBASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.58■□□□□ 0.73
PRUNE2Q8WUY3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRUNE2Q8WUY3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRUNE2Q8WUY3 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.58■□□□□ 0.72
PRUNE2Q8WUY3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.58■□□□□ 0.72
PRUNE2Q8WUY3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRUNE2Q8WUY3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PRUNE2Q8WUY3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PRUNE2Q8WUY3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRUNE2Q8WUY3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PRUNE2Q8WUY3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRUNE2Q8WUY3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 AC007967.2-201ENST00000432613 625 ntBASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 MTDHP5-201ENST00000598980 586 ntBASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 RPS2P1-201ENST00000434010 821 ntBASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRUNE2Q8WUY3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms