Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 AC104390.1-201ENST00000555663 520 ntBASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 AC010240.3-201ENST00000607688 395 ntBASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 AL049812.1-201ENST00000432563 2267 ntBASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF3Q8TEJ3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 HLA-F-220ENST00000434407 884 ntBASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 AL391807.1-203ENST00000604392 2365 ntBASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 AL161938.1-201ENST00000569833 2180 ntBASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3RF3Q8TEJ3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 AL136038.4-201ENST00000603606 1261 ntBASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3RF3Q8TEJ3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 KRT8P7-201ENST00000533003 1432 ntBASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 AC034236.2-201ENST00000606662 1610 ntBASIC22.27■■□□□ 1.16
SH3RF3Q8TEJ3 AC005332.7-201ENST00000614046 2005 ntBASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 HCG4P8-203ENST00000443049 980 ntBASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF3Q8TEJ3 AL162741.1-201ENST00000565563 1558 ntBASIC22.25■■□□□ 1.15
SH3RF3Q8TEJ3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms