Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 KRT18P13-201ENST00000400056 1290 ntBASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 MIR3180-4-201ENST00000582223 153 ntBASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 AL773604.1-201ENST00000617417 272 ntBASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 FAM197Y8-203ENST00000450145 560 ntBASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LINC00116Q8NCU8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 AC034236.2-201ENST00000606662 1610 ntBASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 AL353692.3-201ENST00000407031 1396 ntBASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
LINC00116Q8NCU8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 BNIP3P18-201ENST00000593976 575 ntBASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 AC064862.7-201ENST00000604520 867 ntBASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
LINC00116Q8NCU8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 AL031284.1-201ENST00000419297 478 ntBASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 VENTXP7-201ENST00000475503 772 ntBASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
LINC00116Q8NCU8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LINC00116Q8NCU8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.72■■□□□ 1.39
LINC00116Q8NCU8 MINOS1P3-201ENST00000457048 203 ntBASIC23.72■■□□□ 1.39
LINC00116Q8NCU8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.72■■□□□ 1.39
LINC00116Q8NCU8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.72■■□□□ 1.39
LINC00116Q8NCU8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC23.72■■□□□ 1.39
LINC00116Q8NCU8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LINC00116Q8NCU8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.72■■□□□ 1.39
LINC00116Q8NCU8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC23.72■■□□□ 1.39
LINC00116Q8NCU8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.72■■□□□ 1.39
LINC00116Q8NCU8 AC243591.1-201ENST00000452967 1364 ntBASIC23.72■■□□□ 1.39
LINC00116Q8NCU8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.72■■□□□ 1.39
LINC00116Q8NCU8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms