Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNEP1R1Q8N9A8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 AC020763.4-201ENST00000623414 4170 ntBASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 IRX1P1-201ENST00000438849 1838 ntBASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 GCSHP2-201ENST00000560971 527 ntBASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNEP1R1Q8N9A8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 MIR3180-5-201ENST00000583743 153 ntBASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 AC141586.3-201ENST00000562166 1838 ntBASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 FEM1AP3-201ENST00000403722 1741 ntBASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 AC093484.2-201ENST00000580996 2166 ntBASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 AL032819.2-201ENST00000624543 2162 ntBASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNEP1R1Q8N9A8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 HTR7P1-202ENST00000624664 4411 ntBASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 AL671277.2-201ENST00000458060 996 ntBASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.66■□□□□ 0.26
CNEP1R1Q8N9A8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms