Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
RAB42Q8N4Z0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB42Q8N4Z0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB42Q8N4Z0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RAB42Q8N4Z0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB42Q8N4Z0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB42Q8N4Z0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RAB42Q8N4Z0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB42Q8N4Z0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB42Q8N4Z0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 CYP2D8P-201ENST00000433633 1490 ntBASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 AC010947.1-201ENST00000623454 693 ntBASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 AC133561.5-201ENST00000635547 218 ntBASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RAB42Q8N4Z0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 AL512353.2-201ENST00000448759 1962 ntBASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 MCCD1P1-208ENST00000445732 328 ntBASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 AC145285.6-201ENST00000604632 637 ntBASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 AL023803.3-201ENST00000615559 522 ntBASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 AC083906.6-201ENST00000641366 219 ntBASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 KRT8P9-201ENST00000558927 1449 ntBASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB42Q8N4Z0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 AC092338.2-201ENST00000568827 1415 ntBASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 AC007663.1-201ENST00000438948 1240 ntBASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 LINC01023-201ENST00000606054 436 ntBASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB42Q8N4Z0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms