Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 GCSHP2-201ENST00000560971 527 ntBASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
ARHGEF39Q8N4T4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 HOXB1-202ENST00000577092 1414 ntBASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 AL357033.4-201ENST00000617703 1807 ntBASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 AP000523.1-201ENST00000398242 1049 ntBASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 SEC1P-202ENST00000473944 940 ntBASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 AL049597.2-201ENST00000565575 961 ntBASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ARHGEF39Q8N4T4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 AC022616.7-201ENST00000525383 220 ntBASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 MYC-208ENST00000641036 567 ntBASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 Z98044.1-201ENST00000632503 1764 ntBASIC17.71■□□□□ 0.43
ARHGEF39Q8N4T4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.71■□□□□ 0.42
ARHGEF39Q8N4T4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ARHGEF39Q8N4T4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ARHGEF39Q8N4T4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms