Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PGBD3Q8N328 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PGBD3Q8N328 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PGBD3Q8N328 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PGBD3Q8N328 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PGBD3Q8N328 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PGBD3Q8N328 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PGBD3Q8N328 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 AC026396.1-201ENST00000419388 421 ntBASIC19.06■□□□□ 0.64
PGBD3Q8N328 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 RASA4DP-201ENST00000460726 1199 ntBASIC19.06■□□□□ 0.64
PGBD3Q8N328 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PGBD3Q8N328 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PGBD3Q8N328 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PGBD3Q8N328 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PGBD3Q8N328 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PGBD3Q8N328 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PGBD3Q8N328 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PGBD3Q8N328 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.05■□□□□ 0.64
PGBD3Q8N328 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PGBD3Q8N328 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PGBD3Q8N328 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.05■□□□□ 0.64
PGBD3Q8N328 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.05■□□□□ 0.64
PGBD3Q8N328 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PGBD3Q8N328 AL645929.1-201ENST00000420084 975 ntBASIC19.05■□□□□ 0.64
PGBD3Q8N328 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.05■□□□□ 0.64
PGBD3Q8N328 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
PGBD3Q8N328 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.05■□□□□ 0.64
PGBD3Q8N328 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
PGBD3Q8N328 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.05■□□□□ 0.64
PGBD3Q8N328 AC012313.10-201ENST00000623509 926 ntBASIC19.05■□□□□ 0.64
PGBD3Q8N328 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
PGBD3Q8N328 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PGBD3Q8N328 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.05■□□□□ 0.64
PGBD3Q8N328 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PGBD3Q8N328 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PGBD3Q8N328 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD3Q8N328 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD3Q8N328 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.04■□□□□ 0.64
PGBD3Q8N328 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.04■□□□□ 0.64
PGBD3Q8N328 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.04■□□□□ 0.64
PGBD3Q8N328 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.04■□□□□ 0.64
PGBD3Q8N328 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD3Q8N328 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD3Q8N328 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.04■□□□□ 0.64
PGBD3Q8N328 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD3Q8N328 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD3Q8N328 SDHAP1-207ENST00000440850 2000 ntBASIC19.04■□□□□ 0.64
PGBD3Q8N328 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.04■□□□□ 0.64
PGBD3Q8N328 AC092597.1-201ENST00000487352 616 ntBASIC19.04■□□□□ 0.64
PGBD3Q8N328 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.04■□□□□ 0.64
PGBD3Q8N328 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.04■□□□□ 0.64
PGBD3Q8N328 RNF165-205ENST00000588679 2904 ntBASIC19.04■□□□□ 0.64
PGBD3Q8N328 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PGBD3Q8N328 AC092119.3-201ENST00000612618 583 ntBASIC19.04■□□□□ 0.64
PGBD3Q8N328 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD3Q8N328 GPAT2P1-201ENST00000444924 1672 ntBASIC19.04■□□□□ 0.64
PGBD3Q8N328 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD3Q8N328 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD3Q8N328 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD3Q8N328 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD3Q8N328 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.03■□□□□ 0.64
PGBD3Q8N328 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD3Q8N328 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD3Q8N328 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD3Q8N328 AC036111.1-201ENST00000533973 1582 ntBASIC19.03■□□□□ 0.64
PGBD3Q8N328 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms