Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC116Q8IYX3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC116Q8IYX3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC116Q8IYX3 HEIH-201ENST00000623091 1652 ntBASIC17.71■□□□□ 0.42
CCDC116Q8IYX3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 HCG11-201ENST00000411553 5696 ntBASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC116Q8IYX3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 KRT8P32-201ENST00000512863 1461 ntBASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 UNC93B2-201ENST00000285383 730 ntBASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 ANO7L1-203ENST00000602586 1720 ntBASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 KRT17P2-201ENST00000300992 1314 ntBASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC116Q8IYX3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms