Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 KRT8P3-201ENST00000519669 1449 ntBASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 FOSL1P1-201ENST00000511041 816 ntBASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 AL121772.3-201ENST00000610840 674 ntBASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 DRAXINP1-201ENST00000437611 948 ntBASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 TOB2P1-201ENST00000469761 992 ntBASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEFF1Q8IYR6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.64■□□□□ 0.58
TMEFF1Q8IYR6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TMEFF1Q8IYR6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 LINC01711-201ENST00000598340 967 ntBASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEFF1Q8IYR6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 AC079781.3-201ENST00000449110 356 ntBASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 Z83836.1-201ENST00000624605 1642 ntBASIC18.63■□□□□ 0.57
TMEFF1Q8IYR6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms