Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 PCED1CP-201ENST00000419887 785 ntBASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 KRT18P23-201ENST00000435622 1283 ntBASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 AC092597.1-201ENST00000487352 616 ntBASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 AC091076.1-201ENST00000610741 619 ntBASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC60Q8IWA6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 AC034232.1-201ENST00000506026 1064 ntBASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 HOXB1-202ENST00000577092 1414 ntBASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC60Q8IWA6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 HEIH-201ENST00000623091 1652 ntBASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 HBZP1-201ENST00000354915 429 ntBASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 ZNF444P1-201ENST00000559497 298 ntBASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 AL157888.1-201ENST00000631930 593 ntBASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 AP000550.4-202ENST00000639755 178 ntBASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CCDC60Q8IWA6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 MTMR9LP-203ENST00000426597 1545 ntBASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 AL136038.3-201ENST00000561909 1096 ntBASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC60Q8IWA6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms