Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 AC142381.4-202ENST00000563973 229 ntBASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL3Q8IVW4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 CD177P1-201ENST00000606252 935 ntBASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL3Q8IVW4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 MESTP1-201ENST00000404287 994 ntBASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 AP000692.2-201ENST00000608391 879 ntBASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL3Q8IVW4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 AC098590.1-201ENST00000468126 897 ntBASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKL3Q8IVW4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms