Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.43□□□□□ -0.42
SCXQ7RTU7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCXQ7RTU7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.43□□□□□ -0.42
SCXQ7RTU7 AL445675.2-201ENST00000620291 557 ntBASIC12.43□□□□□ -0.42
SCXQ7RTU7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCXQ7RTU7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCXQ7RTU7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC12.43□□□□□ -0.42
SCXQ7RTU7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SCXQ7RTU7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCXQ7RTU7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCXQ7RTU7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SCXQ7RTU7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.43□□□□□ -0.42
SCXQ7RTU7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SCXQ7RTU7 AL158211.5-201ENST00000623583 2518 ntBASIC12.43□□□□□ -0.42
SCXQ7RTU7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCXQ7RTU7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCXQ7RTU7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCXQ7RTU7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCXQ7RTU7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCXQ7RTU7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCXQ7RTU7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 KRT18P16-201ENST00000510337 1294 ntBASIC12.42□□□□□ -0.42
SCXQ7RTU7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCXQ7RTU7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SCXQ7RTU7 GOLGA6L3-201ENST00000507199 1679 ntBASIC12.42□□□□□ -0.42
SCXQ7RTU7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 FSCN1P1-201ENST00000568912 1481 ntBASIC12.41□□□□□ -0.42
SCXQ7RTU7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.41□□□□□ -0.42
SCXQ7RTU7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 AC092865.7-201ENST00000641832 219 ntBASIC12.41□□□□□ -0.42
SCXQ7RTU7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms