Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 KRT8P32-201ENST00000512863 1461 ntBASIC18.01■□□□□ 0.47
RNF44Q7L0R7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF44Q7L0R7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF44Q7L0R7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18■□□□□ 0.47
RNF44Q7L0R7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
RNF44Q7L0R7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
RNF44Q7L0R7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RNF44Q7L0R7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18■□□□□ 0.47
RNF44Q7L0R7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
RNF44Q7L0R7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18■□□□□ 0.47
RNF44Q7L0R7 MCCD1P1-208ENST00000445732 328 ntBASIC18■□□□□ 0.47
RNF44Q7L0R7 KRT18P21-201ENST00000515767 1272 ntBASIC18■□□□□ 0.47
RNF44Q7L0R7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18■□□□□ 0.47
RNF44Q7L0R7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RNF44Q7L0R7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18■□□□□ 0.47
RNF44Q7L0R7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18■□□□□ 0.47
RNF44Q7L0R7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18■□□□□ 0.47
RNF44Q7L0R7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RNF44Q7L0R7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF44Q7L0R7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 RCC2P3-201ENST00000418112 1537 ntBASIC17.99■□□□□ 0.47
RNF44Q7L0R7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 WWOX-216ENST00000569818 525 ntBASIC17.99■□□□□ 0.47
RNF44Q7L0R7 CR769767.2-201ENST00000622735 460 ntBASIC17.99■□□□□ 0.47
RNF44Q7L0R7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF44Q7L0R7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 AL049812.1-201ENST00000432563 2267 ntBASIC17.98■□□□□ 0.47
RNF44Q7L0R7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 TMPOP1-202ENST00000424642 1267 ntBASIC17.98■□□□□ 0.47
RNF44Q7L0R7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 AL109659.2-201ENST00000606809 1674 ntBASIC17.98■□□□□ 0.47
RNF44Q7L0R7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF44Q7L0R7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms