Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 HOMER2P1-201ENST00000455653 964 ntBASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRAT1Q6PJG6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 AC022616.7-201ENST00000525383 220 ntBASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 AL441883.1-201ENST00000566170 1045 ntBASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRAT1Q6PJG6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 AC034236.2-201ENST00000606662 1610 ntBASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 HOXB1-202ENST00000577092 1414 ntBASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 FAM8A6P-201ENST00000407496 1135 ntBASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 AC092647.4-201ENST00000457211 535 ntBASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 AC112497.1-201ENST00000624824 639 ntBASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRAT1Q6PJG6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms