Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCRAQ6ISU1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTCRAQ6ISU1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PTCRAQ6ISU1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.34■□□□□ 0.69
PTCRAQ6ISU1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PTCRAQ6ISU1 AL691432.2-201ENST00000607222 2038 ntBASIC19.34■□□□□ 0.69
PTCRAQ6ISU1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTCRAQ6ISU1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTCRAQ6ISU1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTCRAQ6ISU1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PTCRAQ6ISU1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTCRAQ6ISU1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.33■□□□□ 0.69
PTCRAQ6ISU1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTCRAQ6ISU1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PTCRAQ6ISU1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTCRAQ6ISU1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 AL591424.1-201ENST00000442569 1213 ntBASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 SDHAP1-207ENST00000440850 2000 ntBASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 LINC00565-201ENST00000562710 2331 ntBASIC19.33■□□□□ 0.68
PTCRAQ6ISU1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 YBX2P1-201ENST00000394192 760 ntBASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 FGFR3P6-201ENST00000457012 610 ntBASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 IGHV3-22-201ENST00000520721 359 ntBASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 AC008556.1-201ENST00000610908 2040 ntBASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 TREX1-205ENST00000625293 1783 ntBASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCRAQ6ISU1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 DNAJB3-201ENST00000446806 729 ntBASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 MIR3197-201ENST00000582241 73 ntBASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 AC134684.3-201ENST00000641758 218 ntBASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTCRAQ6ISU1 RCC2P3-201ENST00000418112 1537 ntBASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 MTDHP3-201ENST00000594186 672 ntBASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTCRAQ6ISU1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms