Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC28.43■■■□□ 2.14
CDC42BPAQ5VT25 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
CDC42BPAQ5VT25 BNIP3P18-201ENST00000593976 575 ntBASIC28.43■■■□□ 2.14
CDC42BPAQ5VT25 AC024563.2-201ENST00000603282 481 ntBASIC28.43■■■□□ 2.14
CDC42BPAQ5VT25 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC28.42■■■□□ 2.14
CDC42BPAQ5VT25 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 VPS51-217ENST00000639871 243 ntTSL 5 BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 HEIH-201ENST00000623091 1652 ntBASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC28.41■■■□□ 2.14
CDC42BPAQ5VT25 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 AL662844.1-201ENST00000546340 181 ntBASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 MIR7706-201ENST00000613747 67 ntBASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 FEM1AP3-201ENST00000403722 1741 ntBASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 KRT18P41-201ENST00000518924 1277 ntBASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 GXYLT1P4-201ENST00000613576 1192 ntBASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CDC42BPAQ5VT25 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 AC141586.3-201ENST00000562166 1838 ntBASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 RN7SL606P-201ENST00000472779 293 ntBASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 PENK-208ENST00000523051 772 ntTSL 5 BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 FICD-205ENST00000552758 603 ntTSL 2 BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CDC42BPAQ5VT25 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
CDC42BPAQ5VT25 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
CDC42BPAQ5VT25 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
CDC42BPAQ5VT25 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
CDC42BPAQ5VT25 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 AF238378.1-201ENST00000526806 358 ntBASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 CALM1-205ENST00000553542 877 ntTSL 5 BASIC28.38■■■□□ 2.13
CDC42BPAQ5VT25 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms