Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 POU5F1P3-201ENST00000428824 1078 ntBASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RUNDC3AQ59EK9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.75■□□□□ 0.43
RUNDC3AQ59EK9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 Z85996.1-201ENST00000494644 937 ntBASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 UNC93B5-201ENST00000530315 699 ntBASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 AL109923.1-201ENST00000618799 583 ntBASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 KRT8P32-201ENST00000512863 1461 ntBASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.74■□□□□ 0.43
RUNDC3AQ59EK9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 AC008403.3-201ENST00000598924 454 ntBASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.73■□□□□ 0.43
RUNDC3AQ59EK9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms