Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 AC073592.3-201ENST00000625118 1834 ntBASIC16.79■□□□□ 0.28
CCDC58Q4VC31 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC58Q4VC31 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 ABALON-201ENST00000629058 1903 ntBASIC16.78■□□□□ 0.28
CCDC58Q4VC31 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 AC124283.5-201ENST00000624661 1809 ntBASIC16.78■□□□□ 0.28
CCDC58Q4VC31 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 BX276092.2-201ENST00000417668 665 ntBASIC16.78■□□□□ 0.28
CCDC58Q4VC31 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC58Q4VC31 HTR7P1-202ENST00000624664 4411 ntBASIC16.78■□□□□ 0.28
CCDC58Q4VC31 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 TUBB8P6-201ENST00000436895 1288 ntBASIC16.77■□□□□ 0.28
CCDC58Q4VC31 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 AF201337.1-201ENST00000520239 748 ntBASIC16.77■□□□□ 0.28
CCDC58Q4VC31 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 AC006557.6-201ENST00000623071 864 ntBASIC16.77■□□□□ 0.28
CCDC58Q4VC31 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC58Q4VC31 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
CCDC58Q4VC31 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC58Q4VC31 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC58Q4VC31 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC58Q4VC31 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms