Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 CKBP1-201ENST00000565489 1086 ntBASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 AL512604.3-201ENST00000569583 964 ntBASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144BQ3MJ40 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 AL031432.5-201ENST00000641059 760 ntBASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC144BQ3MJ40 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 AP003041.3-201ENST00000527151 707 ntBASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 AP000550.4-202ENST00000639755 178 ntBASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC144BQ3MJ40 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.77■■□□□ 1.07
CCDC144BQ3MJ40 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC144BQ3MJ40 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.77■■□□□ 1.07
CCDC144BQ3MJ40 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 AL023973.1-201ENST00000624619 620 ntBASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC144BQ3MJ40 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 FAM86EP-206ENST00000510506 987 ntBASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 AL441883.1-201ENST00000566170 1045 ntBASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC144BQ3MJ40 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms