Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.19
PDS5AQ29RF7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.52■■□□□ 1.19
PDS5AQ29RF7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PDS5AQ29RF7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 AL357033.4-201ENST00000617703 1807 ntBASIC22.51■■□□□ 1.19
PDS5AQ29RF7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC22.51■■□□□ 1.19
PDS5AQ29RF7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDS5AQ29RF7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.5■■□□□ 1.19
PDS5AQ29RF7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDS5AQ29RF7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PDS5AQ29RF7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDS5AQ29RF7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
PDS5AQ29RF7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.5■■□□□ 1.19
PDS5AQ29RF7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDS5AQ29RF7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDS5AQ29RF7 NPAP1P7-201ENST00000613027 823 ntBASIC22.5■■□□□ 1.19
PDS5AQ29RF7 KRT8P50-201ENST00000562022 1438 ntBASIC22.5■■□□□ 1.19
PDS5AQ29RF7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDS5AQ29RF7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDS5AQ29RF7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 AP000593.1-201ENST00000393668 712 ntBASIC22.49■■□□□ 1.19
PDS5AQ29RF7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 AC009065.1-201ENST00000564055 1225 ntBASIC22.49■■□□□ 1.19
PDS5AQ29RF7 AC011498.5-201ENST00000592027 486 ntBASIC22.49■■□□□ 1.19
PDS5AQ29RF7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PDS5AQ29RF7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PDS5AQ29RF7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 AC093458.2-201ENST00000623150 629 ntBASIC22.47■■□□□ 1.19
PDS5AQ29RF7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDS5AQ29RF7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms