Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.27■□□□□ 0.51
CACNA1EQ15878 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CACNA1EQ15878 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
CACNA1EQ15878 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
CACNA1EQ15878 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CACNA1EQ15878 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.27■□□□□ 0.51
CACNA1EQ15878 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
CACNA1EQ15878 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CACNA1EQ15878 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.27■□□□□ 0.51
CACNA1EQ15878 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CACNA1EQ15878 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1EQ15878 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1EQ15878 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1EQ15878 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1EQ15878 SAPCD2P3-201ENST00000455031 850 ntBASIC18.26■□□□□ 0.51
CACNA1EQ15878 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1EQ15878 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1EQ15878 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 KRT18P58-201ENST00000527480 1120 ntBASIC18.26■□□□□ 0.51
CACNA1EQ15878 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.26■□□□□ 0.51
CACNA1EQ15878 AP005901.3-202ENST00000581653 237 ntBASIC18.26■□□□□ 0.51
CACNA1EQ15878 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
CACNA1EQ15878 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.25■□□□□ 0.51
CACNA1EQ15878 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 AKR1C7P-201ENST00000305623 895 ntBASIC18.25■□□□□ 0.51
CACNA1EQ15878 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CACNA1EQ15878 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CACNA1EQ15878 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.25■□□□□ 0.51
CACNA1EQ15878 TP73-AS1-207ENST00000624167 988 ntBASIC18.25■□□□□ 0.51
CACNA1EQ15878 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.25■□□□□ 0.51
CACNA1EQ15878 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.25■□□□□ 0.51
CACNA1EQ15878 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CACNA1EQ15878 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.25■□□□□ 0.51
CACNA1EQ15878 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CACNA1EQ15878 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 KRT18P67-201ENST00000432816 1264 ntBASIC18.24■□□□□ 0.51
CACNA1EQ15878 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 VENTXP7-201ENST00000475503 772 ntBASIC18.24■□□□□ 0.51
CACNA1EQ15878 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 AL512353.2-201ENST00000448759 1962 ntBASIC18.24■□□□□ 0.51
CACNA1EQ15878 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 AC024563.2-201ENST00000603282 481 ntBASIC18.24■□□□□ 0.51
CACNA1EQ15878 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.24■□□□□ 0.51
CACNA1EQ15878 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.24■□□□□ 0.51
CACNA1EQ15878 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CACNA1EQ15878 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CACNA1EQ15878 KRT18P41-201ENST00000518924 1277 ntBASIC18.23■□□□□ 0.51
CACNA1EQ15878 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.23■□□□□ 0.51
CACNA1EQ15878 MIR3180-4-201ENST00000582223 153 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms