Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
HMGXB3Q12766 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
HMGXB3Q12766 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC33.06■■■□□ 2.88
HMGXB3Q12766 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
HMGXB3Q12766 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
HMGXB3Q12766 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
HMGXB3Q12766 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
HMGXB3Q12766 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
HMGXB3Q12766 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC33.06■■■□□ 2.88
HMGXB3Q12766 DDT-203ENST00000403754 569 ntTSL 3 BASIC33.06■■■□□ 2.88
HMGXB3Q12766 DDT-206ENST00000430101 573 ntTSL 2 BASIC33.06■■■□□ 2.88
HMGXB3Q12766 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
HMGXB3Q12766 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC33.06■■■□□ 2.88
HMGXB3Q12766 AC027601.4-201ENST00000611259 610 ntBASIC33.06■■■□□ 2.88
HMGXB3Q12766 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
HMGXB3Q12766 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
HMGXB3Q12766 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC33.06■■■□□ 2.88
HMGXB3Q12766 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC33.06■■■□□ 2.88
HMGXB3Q12766 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
HMGXB3Q12766 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
HMGXB3Q12766 YBX2P1-201ENST00000394192 760 ntBASIC33.05■■■□□ 2.88
HMGXB3Q12766 HNRNPA1P28-201ENST00000424481 961 ntBASIC33.05■■■□□ 2.88
HMGXB3Q12766 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC33.05■■■□□ 2.88
HMGXB3Q12766 REEP1-209ENST00000541910 969 ntTSL 2 BASIC33.05■■■□□ 2.88
HMGXB3Q12766 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC33.05■■■□□ 2.88
HMGXB3Q12766 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
HMGXB3Q12766 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
HMGXB3Q12766 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC33.05■■■□□ 2.88
HMGXB3Q12766 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC33.05■■■□□ 2.88
HMGXB3Q12766 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC33.05■■■□□ 2.88
HMGXB3Q12766 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC33.05■■■□□ 2.88
HMGXB3Q12766 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
HMGXB3Q12766 AC073314.1-201ENST00000568729 2216 ntBASIC33.05■■■□□ 2.88
HMGXB3Q12766 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
HMGXB3Q12766 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC33.04■■■□□ 2.88
HMGXB3Q12766 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC33.04■■■□□ 2.88
HMGXB3Q12766 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
HMGXB3Q12766 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
HMGXB3Q12766 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
HMGXB3Q12766 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
HMGXB3Q12766 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
HMGXB3Q12766 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
HMGXB3Q12766 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC33.04■■■□□ 2.88
HMGXB3Q12766 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC33.04■■■□□ 2.88
HMGXB3Q12766 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC33.04■■■□□ 2.88
HMGXB3Q12766 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
HMGXB3Q12766 AL356488.2-201ENST00000602755 427 ntBASIC33.04■■■□□ 2.88
HMGXB3Q12766 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
HMGXB3Q12766 TREX1-205ENST00000625293 1783 ntBASIC33.04■■■□□ 2.88
HMGXB3Q12766 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
HMGXB3Q12766 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
HMGXB3Q12766 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
HMGXB3Q12766 AC004967.1-201ENST00000453589 447 ntBASIC33.03■■■□□ 2.88
HMGXB3Q12766 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC33.03■■■□□ 2.88
HMGXB3Q12766 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC33.03■■■□□ 2.88
HMGXB3Q12766 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
HMGXB3Q12766 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
HMGXB3Q12766 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC33.03■■■□□ 2.88
HMGXB3Q12766 AC104109.2-201ENST00000602919 1418 ntBASIC33.03■■■□□ 2.88
HMGXB3Q12766 PAN3-AS1-201ENST00000563843 1351 ntBASIC33.03■■■□□ 2.88
HMGXB3Q12766 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
HMGXB3Q12766 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
HMGXB3Q12766 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC33.02■■■□□ 2.88
HMGXB3Q12766 THAP5-204ENST00000438865 868 ntTSL 2 BASIC33.02■■■□□ 2.88
HMGXB3Q12766 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC33.02■■■□□ 2.88
HMGXB3Q12766 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC33.02■■■□□ 2.88
HMGXB3Q12766 AC006333.2-201ENST00000607957 2099 ntBASIC33.02■■■□□ 2.88
HMGXB3Q12766 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
HMGXB3Q12766 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
HMGXB3Q12766 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC33.02■■■□□ 2.88
HMGXB3Q12766 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC33.02■■■□□ 2.88
HMGXB3Q12766 TEX21P-204ENST00000641479 1693 ntBASIC33.02■■■□□ 2.88
HMGXB3Q12766 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC33.02■■■□□ 2.88
HMGXB3Q12766 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
HMGXB3Q12766 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC33.02■■■□□ 2.88
HMGXB3Q12766 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC33.01■■■□□ 2.88
HMGXB3Q12766 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
HMGXB3Q12766 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
HMGXB3Q12766 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
HMGXB3Q12766 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
HMGXB3Q12766 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC33.01■■■□□ 2.87
HMGXB3Q12766 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
HMGXB3Q12766 IMP4-203ENST00000409935 958 ntTSL 5 BASIC33.01■■■□□ 2.87
HMGXB3Q12766 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC33.01■■■□□ 2.87
HMGXB3Q12766 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.87
HMGXB3Q12766 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC33.01■■■□□ 2.87
HMGXB3Q12766 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC33.01■■■□□ 2.87
HMGXB3Q12766 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC33.01■■■□□ 2.87
HMGXB3Q12766 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC33.01■■■□□ 2.87
HMGXB3Q12766 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
HMGXB3Q12766 KRT8P32-201ENST00000512863 1461 ntBASIC33.01■■■□□ 2.87
HMGXB3Q12766 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC33■■■□□ 2.87
HMGXB3Q12766 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
HMGXB3Q12766 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC33■■■□□ 2.87
HMGXB3Q12766 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
HMGXB3Q12766 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
HMGXB3Q12766 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC33■■■□□ 2.87
HMGXB3Q12766 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC33■■■□□ 2.87
HMGXB3Q12766 CAND2-206ENST00000626378 333 ntTSL 5 BASIC33■■■□□ 2.87
HMGXB3Q12766 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC33■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms