Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HSPG2P98160 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HSPG2P98160 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HSPG2P98160 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.63□□□□□ -0.55
HSPG2P98160 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
HSPG2P98160 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
HSPG2P98160 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 RPS2P28-201ENST00000314255 741 ntBASIC11.62□□□□□ -0.55
HSPG2P98160 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 AC009947.1-201ENST00000444350 727 ntBASIC11.62□□□□□ -0.55
HSPG2P98160 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC11.62□□□□□ -0.55
HSPG2P98160 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.62□□□□□ -0.55
HSPG2P98160 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC11.62□□□□□ -0.55
HSPG2P98160 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.62□□□□□ -0.55
HSPG2P98160 MTDHP5-201ENST00000598980 586 ntBASIC11.62□□□□□ -0.55
HSPG2P98160 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.62□□□□□ -0.55
HSPG2P98160 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.62□□□□□ -0.55
HSPG2P98160 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.62□□□□□ -0.55
HSPG2P98160 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HSPG2P98160 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC11.62□□□□□ -0.55
HSPG2P98160 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
HSPG2P98160 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.62□□□□□ -0.55
HSPG2P98160 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.62□□□□□ -0.55
HSPG2P98160 SDHAP1-207ENST00000440850 2000 ntBASIC11.62□□□□□ -0.55
HSPG2P98160 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 AL162377.1-201ENST00000618844 1793 ntBASIC11.62□□□□□ -0.55
HSPG2P98160 AC092720.2-201ENST00000602388 1665 ntBASIC11.62□□□□□ -0.55
HSPG2P98160 AC006128.1-201ENST00000624704 1661 ntBASIC11.62□□□□□ -0.55
HSPG2P98160 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
HSPG2P98160 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC11.62□□□□□ -0.55
HSPG2P98160 AL645939.2-201ENST00000427340 991 ntBASIC11.62□□□□□ -0.55
HSPG2P98160 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.62□□□□□ -0.55
HSPG2P98160 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HSPG2P98160 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC11.62□□□□□ -0.55
HSPG2P98160 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HSPG2P98160 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HSPG2P98160 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HSPG2P98160 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC11.61□□□□□ -0.55
HSPG2P98160 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.61□□□□□ -0.55
HSPG2P98160 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC11.61□□□□□ -0.55
HSPG2P98160 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.61□□□□□ -0.55
HSPG2P98160 AL096865.1-201ENST00000606796 927 ntBASIC11.61□□□□□ -0.55
HSPG2P98160 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.61□□□□□ -0.55
HSPG2P98160 AC083906.6-201ENST00000641366 219 ntBASIC11.61□□□□□ -0.55
HSPG2P98160 AC079781.4-201ENST00000641908 219 ntBASIC11.61□□□□□ -0.55
HSPG2P98160 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HSPG2P98160 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC11.61□□□□□ -0.55
HSPG2P98160 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.61□□□□□ -0.55
HSPG2P98160 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC11.61□□□□□ -0.55
HSPG2P98160 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
HSPG2P98160 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
HSPG2P98160 AC007274.1-201ENST00000439805 662 ntBASIC11.61□□□□□ -0.55
HSPG2P98160 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.61□□□□□ -0.55
HSPG2P98160 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
HSPG2P98160 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.61□□□□□ -0.55
HSPG2P98160 MTDHP3-201ENST00000594186 672 ntBASIC11.61□□□□□ -0.55
HSPG2P98160 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HSPG2P98160 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HSPG2P98160 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HSPG2P98160 AC008556.1-201ENST00000610908 2040 ntBASIC11.61□□□□□ -0.55
HSPG2P98160 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HSPG2P98160 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.61□□□□□ -0.55
HSPG2P98160 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.61□□□□□ -0.55
HSPG2P98160 AC007967.2-201ENST00000432613 625 ntBASIC11.61□□□□□ -0.55
HSPG2P98160 AC002347.1-201ENST00000569543 541 ntBASIC11.61□□□□□ -0.55
HSPG2P98160 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
HSPG2P98160 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
HSPG2P98160 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
HSPG2P98160 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HSPG2P98160 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC11.61□□□□□ -0.55
HSPG2P98160 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HSPG2P98160 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.61□□□□□ -0.55
HSPG2P98160 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HSPG2P98160 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
HSPG2P98160 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HSPG2P98160 MIR770-201ENST00000390219 98 ntBASIC11.6□□□□□ -0.55
HSPG2P98160 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC11.6□□□□□ -0.55
HSPG2P98160 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.6□□□□□ -0.55
HSPG2P98160 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.6□□□□□ -0.55
HSPG2P98160 INTS4P1-201ENST00000438455 1935 ntBASIC11.6□□□□□ -0.55
HSPG2P98160 KRT8P3-201ENST00000519669 1449 ntBASIC11.6□□□□□ -0.55
HSPG2P98160 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HSPG2P98160 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HSPG2P98160 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HSPG2P98160 AC040169.1-201ENST00000565382 521 ntBASIC11.6□□□□□ -0.55
HSPG2P98160 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.6□□□□□ -0.55
HSPG2P98160 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.6□□□□□ -0.55
HSPG2P98160 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC11.6□□□□□ -0.55
HSPG2P98160 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms