Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.81■■□□□ 1.08
IRX3P78415 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
IRX3P78415 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.81■■□□□ 1.08
IRX3P78415 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX3P78415 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX3P78415 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX3P78415 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.81■■□□□ 1.08
IRX3P78415 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
IRX3P78415 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX3P78415 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX3P78415 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
IRX3P78415 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
IRX3P78415 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
IRX3P78415 AC111152.3-201ENST00000569699 673 ntBASIC21.81■■□□□ 1.08
IRX3P78415 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.81■■□□□ 1.08
IRX3P78415 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.81■■□□□ 1.08
IRX3P78415 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX3P78415 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX3P78415 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX3P78415 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
IRX3P78415 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX3P78415 KRT8P3-201ENST00000519669 1449 ntBASIC21.8■■□□□ 1.08
IRX3P78415 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.8■■□□□ 1.08
IRX3P78415 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.8■■□□□ 1.08
IRX3P78415 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
IRX3P78415 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 AL162741.1-201ENST00000565563 1558 ntBASIC21.8■■□□□ 1.08
IRX3P78415 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.8■■□□□ 1.08
IRX3P78415 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.8■■□□□ 1.08
IRX3P78415 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
IRX3P78415 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.8■■□□□ 1.08
IRX3P78415 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.8■■□□□ 1.08
IRX3P78415 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.8■■□□□ 1.08
IRX3P78415 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 MIR3180-1-201ENST00000580374 94 ntBASIC21.8■■□□□ 1.08
IRX3P78415 RN7SL510P-201ENST00000581311 263 ntBASIC21.8■■□□□ 1.08
IRX3P78415 MIR3180-3-201ENST00000584616 94 ntBASIC21.8■■□□□ 1.08
IRX3P78415 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
IRX3P78415 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.8■■□□□ 1.08
IRX3P78415 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.8■■□□□ 1.08
IRX3P78415 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 AL157888.1-201ENST00000631930 593 ntBASIC21.8■■□□□ 1.08
IRX3P78415 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
IRX3P78415 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.8■■□□□ 1.08
IRX3P78415 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX3P78415 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.79■■□□□ 1.08
IRX3P78415 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
IRX3P78415 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
IRX3P78415 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.79■■□□□ 1.08
IRX3P78415 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.79■■□□□ 1.08
IRX3P78415 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.79■■□□□ 1.08
IRX3P78415 AP002383.4-201ENST00000442518 975 ntBASIC21.79■■□□□ 1.08
IRX3P78415 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.79■■□□□ 1.08
IRX3P78415 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.79■■□□□ 1.08
IRX3P78415 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.79■■□□□ 1.08
IRX3P78415 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 AC079602.3-201ENST00000623931 403 ntBASIC21.79■■□□□ 1.08
IRX3P78415 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.79■■□□□ 1.08
IRX3P78415 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.79■■□□□ 1.08
IRX3P78415 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
IRX3P78415 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
IRX3P78415 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
IRX3P78415 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.79■■□□□ 1.08
IRX3P78415 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
IRX3P78415 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
IRX3P78415 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.79■■□□□ 1.08
IRX3P78415 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.79■■□□□ 1.08
IRX3P78415 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX3P78415 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IRX3P78415 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
IRX3P78415 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.78■■□□□ 1.08
IRX3P78415 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IRX3P78415 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.78■■□□□ 1.08
IRX3P78415 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms