Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNA1P78396 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNA1P78396 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNA1P78396 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNA1P78396 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.34■■□□□ 1.01
CCNA1P78396 AC009078.2-202ENST00000463353 338 ntBASIC21.34■■□□□ 1.01
CCNA1P78396 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNA1P78396 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.34■■□□□ 1.01
CCNA1P78396 AC074051.2-201ENST00000565115 352 ntBASIC21.34■■□□□ 1.01
CCNA1P78396 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
CCNA1P78396 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.34■■□□□ 1.01
CCNA1P78396 GPR32P1-201ENST00000601788 811 ntBASIC21.34■■□□□ 1.01
CCNA1P78396 AC104692.2-201ENST00000603054 253 ntBASIC21.34■■□□□ 1.01
CCNA1P78396 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNA1P78396 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.34■■□□□ 1.01
CCNA1P78396 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNA1P78396 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNA1P78396 FEM1AP3-201ENST00000403722 1741 ntBASIC21.34■■□□□ 1.01
CCNA1P78396 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.34■■□□□ 1.01
CCNA1P78396 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.34■■□□□ 1.01
CCNA1P78396 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNA1P78396 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNA1P78396 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNA1P78396 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNA1P78396 AC112907.3-201ENST00000577781 2400 ntBASIC21.34■■□□□ 1.01
CCNA1P78396 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNA1P78396 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNA1P78396 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNA1P78396 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNA1P78396 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.33■■□□□ 1.01
CCNA1P78396 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNA1P78396 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.33■■□□□ 1.01
CCNA1P78396 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNA1P78396 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNA1P78396 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.33■■□□□ 1.01
CCNA1P78396 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCNA1P78396 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCNA1P78396 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCNA1P78396 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CCNA1P78396 AC009065.1-201ENST00000564055 1225 ntBASIC21.33■■□□□ 1.01
CCNA1P78396 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.33■■□□□ 1.01
CCNA1P78396 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CCNA1P78396 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CCNA1P78396 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.33■■□□□ 1.01
CCNA1P78396 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.33■■□□□ 1
CCNA1P78396 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCNA1P78396 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCNA1P78396 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
CCNA1P78396 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCNA1P78396 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCNA1P78396 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNA1P78396 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CCNA1P78396 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNA1P78396 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNA1P78396 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNA1P78396 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNA1P78396 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCNA1P78396 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CCNA1P78396 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.32■■□□□ 1
CCNA1P78396 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.32■■□□□ 1
CCNA1P78396 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.32■■□□□ 1
CCNA1P78396 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.32■■□□□ 1
CCNA1P78396 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCNA1P78396 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCNA1P78396 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.32■■□□□ 1
CCNA1P78396 AC233702.3-201ENST00000578656 1387 ntBASIC21.32■■□□□ 1
CCNA1P78396 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNA1P78396 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNA1P78396 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNA1P78396 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CCNA1P78396 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.31■■□□□ 1
CCNA1P78396 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.31■■□□□ 1
CCNA1P78396 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.31■■□□□ 1
CCNA1P78396 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.31■■□□□ 1
CCNA1P78396 AP000347.1-202ENST00000435868 847 ntBASIC21.31■■□□□ 1
CCNA1P78396 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.31■■□□□ 1
CCNA1P78396 GUSBP12-201ENST00000513727 720 ntBASIC21.31■■□□□ 1
CCNA1P78396 AC138894.3-201ENST00000603787 634 ntBASIC21.31■■□□□ 1
CCNA1P78396 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.31■■□□□ 1
CCNA1P78396 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.31■■□□□ 1
CCNA1P78396 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 AC006333.2-201ENST00000607957 2099 ntBASIC21.31■■□□□ 1
CCNA1P78396 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CCNA1P78396 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCNA1P78396 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
CCNA1P78396 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNA1P78396 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
CCNA1P78396 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNA1P78396 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms