Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S1P61966 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.91■□□□□ 0.62
AP1S1P61966 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
AP1S1P61966 BX664615.1-201ENST00000443558 458 ntBASIC18.91■□□□□ 0.62
AP1S1P61966 AC009947.2-201ENST00000444014 672 ntBASIC18.91■□□□□ 0.62
AP1S1P61966 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.91■□□□□ 0.62
AP1S1P61966 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.91■□□□□ 0.62
AP1S1P61966 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.91■□□□□ 0.62
AP1S1P61966 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.91■□□□□ 0.62
AP1S1P61966 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S1P61966 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S1P61966 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S1P61966 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP1S1P61966 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
AP1S1P61966 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
AP1S1P61966 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.9■□□□□ 0.62
AP1S1P61966 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.9■□□□□ 0.62
AP1S1P61966 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.9■□□□□ 0.62
AP1S1P61966 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
AP1S1P61966 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
AP1S1P61966 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
AP1S1P61966 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.9■□□□□ 0.62
AP1S1P61966 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.9■□□□□ 0.62
AP1S1P61966 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.9■□□□□ 0.62
AP1S1P61966 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
AP1S1P61966 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.9■□□□□ 0.62
AP1S1P61966 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.9■□□□□ 0.62
AP1S1P61966 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
AP1S1P61966 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.9■□□□□ 0.62
AP1S1P61966 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 AC018445.3-201ENST00000624177 1945 ntBASIC18.9■□□□□ 0.62
AP1S1P61966 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.9■□□□□ 0.62
AP1S1P61966 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.9■□□□□ 0.62
AP1S1P61966 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP1S1P61966 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.89■□□□□ 0.62
AP1S1P61966 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.89■□□□□ 0.62
AP1S1P61966 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.89■□□□□ 0.62
AP1S1P61966 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S1P61966 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S1P61966 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S1P61966 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.89■□□□□ 0.61
AP1S1P61966 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.89■□□□□ 0.61
AP1S1P61966 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.89■□□□□ 0.61
AP1S1P61966 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S1P61966 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S1P61966 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S1P61966 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.89■□□□□ 0.61
AP1S1P61966 FAM210CP-201ENST00000445714 574 ntBASIC18.89■□□□□ 0.61
AP1S1P61966 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.89■□□□□ 0.61
AP1S1P61966 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
AP1S1P61966 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.89■□□□□ 0.61
AP1S1P61966 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.89■□□□□ 0.61
AP1S1P61966 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.89■□□□□ 0.61
AP1S1P61966 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S1P61966 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S1P61966 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.89■□□□□ 0.61
AP1S1P61966 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S1P61966 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
AP1S1P61966 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.89■□□□□ 0.61
AP1S1P61966 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.89■□□□□ 0.61
AP1S1P61966 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S1P61966 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.89■□□□□ 0.61
AP1S1P61966 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S1P61966 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP1S1P61966 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.88■□□□□ 0.61
AP1S1P61966 AL357033.4-201ENST00000617703 1807 ntBASIC18.88■□□□□ 0.61
AP1S1P61966 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S1P61966 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
AP1S1P61966 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
AP1S1P61966 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
AP1S1P61966 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
AP1S1P61966 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S1P61966 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S1P61966 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.88■□□□□ 0.61
AP1S1P61966 COX11P1-201ENST00000489116 835 ntBASIC18.88■□□□□ 0.61
AP1S1P61966 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.88■□□□□ 0.61
AP1S1P61966 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.88■□□□□ 0.61
AP1S1P61966 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.88■□□□□ 0.61
AP1S1P61966 RN7SL850P-201ENST00000579959 291 ntBASIC18.88■□□□□ 0.61
AP1S1P61966 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S1P61966 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S1P61966 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S1P61966 KRT8P7-201ENST00000533003 1432 ntBASIC18.88■□□□□ 0.61
AP1S1P61966 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms