Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.79■□□□□ 0.44
NR1H2P55055 AC105020.6-201ENST00000621523 1217 ntBASIC17.79■□□□□ 0.44
NR1H2P55055 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NR1H2P55055 TEX21P-204ENST00000641479 1693 ntBASIC17.79■□□□□ 0.44
NR1H2P55055 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NR1H2P55055 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.79■□□□□ 0.44
NR1H2P55055 PCDHA12-202ENST00000613593 2588 ntBASIC17.79■□□□□ 0.44
NR1H2P55055 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NR1H2P55055 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.79■□□□□ 0.44
NR1H2P55055 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NR1H2P55055 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.78■□□□□ 0.44
NR1H2P55055 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.78■□□□□ 0.44
NR1H2P55055 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
NR1H2P55055 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.78■□□□□ 0.44
NR1H2P55055 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 AC073592.3-201ENST00000625118 1834 ntBASIC17.78■□□□□ 0.44
NR1H2P55055 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.78■□□□□ 0.44
NR1H2P55055 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NR1H2P55055 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.78■□□□□ 0.44
NR1H2P55055 AC098590.1-201ENST00000468126 897 ntBASIC17.78■□□□□ 0.44
NR1H2P55055 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.78■□□□□ 0.44
NR1H2P55055 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.78■□□□□ 0.44
NR1H2P55055 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.78■□□□□ 0.44
NR1H2P55055 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.78■□□□□ 0.44
NR1H2P55055 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NR1H2P55055 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 AC092368.3-202ENST00000574180 1591 ntBASIC17.78■□□□□ 0.44
NR1H2P55055 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NR1H2P55055 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.78■□□□□ 0.44
NR1H2P55055 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.78■□□□□ 0.44
NR1H2P55055 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.78■□□□□ 0.44
NR1H2P55055 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NR1H2P55055 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
NR1H2P55055 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.77■□□□□ 0.44
NR1H2P55055 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.77■□□□□ 0.44
NR1H2P55055 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
NR1H2P55055 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.77■□□□□ 0.44
NR1H2P55055 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.77■□□□□ 0.44
NR1H2P55055 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NR1H2P55055 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.77■□□□□ 0.44
NR1H2P55055 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 AC126763.1-201ENST00000552015 2118 ntBASIC17.77■□□□□ 0.44
NR1H2P55055 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.77■□□□□ 0.44
NR1H2P55055 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 AL158047.1-201ENST00000445918 881 ntBASIC17.77■□□□□ 0.44
NR1H2P55055 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
NR1H2P55055 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NR1H2P55055 PNMA6B-201ENST00000538162 1200 ntBASIC17.77■□□□□ 0.44
NR1H2P55055 AC142381.4-202ENST00000563973 229 ntBASIC17.77■□□□□ 0.44
NR1H2P55055 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.77■□□□□ 0.44
NR1H2P55055 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H2P55055 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NR1H2P55055 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
NR1H2P55055 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NR1H2P55055 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NR1H2P55055 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.76■□□□□ 0.43
NR1H2P55055 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.76■□□□□ 0.43
NR1H2P55055 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H2P55055 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms